It's true AoPS doesn't have make-up classes, but this hasn't been an issue for us, as you have a hard copy of the reading materials, all the homework/exercises are online, and then you also get a copy of class notes from the teacher for that week that you can review. Honestly we haven't had the occasion to use the notes though, DS (4th grade AAP) has been able to stay current with the material on the weeks he has missed this year (2 or 3 so far) by just doing the BA reading materials and online homework.
Both RSM and AoPS are great programs for advanced students (and RSM also ok for kids who are on-grade), I'd recommend picking primarily based on which one resonates with your kid, key thing is that they are enjoying it. Logistical concerns may apply as well, RSM is 5 mins away for us vs. 15 for AoPS, which is why we tried RSM first.
DD likes RSM and has remained there, but DS really didn't, so we swapped him over to AoPS and he totally LOVES it. DD is jealous that DS gets to do his math homework online, but she is 2nd grade and we find it's easier at her level to work through problems with her in the physical RSM book, and she enjoys having that 1:1 coaching time with mom or dad as well.
We do feel that sometimes DS rushes through his AoPS homework online and just tries to get to the answer without fully understanding the process and doesn't read the instructions. So we're working with him on that, sometime have him redo the exercises verbally explaining his though process to us. In that regard, paper homework would maybe be better, but he's so much happier with the class that I'd rather have him voluntarily engaged with the online HW than resistant with paper HW.
Both programs cover core math skills as well as the more creative/flexible problem solving and mathematical thinking areas, but it is just a question of degree: RSM seems to focus more heavily on the former, AoPS puts more emphasis on the latter.